Publications

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Atkins K.E., Townsend J.P., Medlock J., Galvani A.P..  2013.  Epidemiological mechanisms of genetic resistance to kuru. Journal of the Royal Society – Interface 10(85). .
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Burmeister AR, Fortier A, Roush C, Lessing AJ, Bender RG, Barahman R, Grant R, Chan BK, Turner PE.  2020.  Pleiotropy complicates a trade-off between phage resistance and antibiotic resistance. Proceedings of the National Academy of Sciences .
Byars S.G., Stearns S.C., Boomsma J.J..  2018.  Association of long-term risk of respiratory, allergic, and infectious diseases with removal of adenoids and tonsils in childhood. JAMA Otolaryngology – Head and Neck Surgery 144: 594-603.
Byars S.G., Huang Q.Q., Gray L-A., Bakshi A., Ripatti S., Abraham G., Stearns S.C., Inouye M.  2017.  Genetic loci associated with coronary artery disease harbor evidence of selection and antagonistic pleiotropy. PLOS Genetics.
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Cannataro V.L., Gaffney S.G., Sasaki T., Issaeva N., Grewal N.K.S., Grandis J.R., Yarbrough W.G., Burtness B., Anderson K.S., Townsend J.P..  2019.  APOBEC-induced mutations and their cancer effect size in head and neck squamous cell carcinoma. Oncogene 38.
Cannataro V.L., Gaffney S.G., Stender C., Zhao Z.-M., Philips M., Greenstein A., Townsend J.P..  2018.  Heterogeneity and mutation in KRAS and associated oncogenes: evaluating the potential for evolution of resistance to targeting of KRAS G12C. Oncogene..
Cannataro V.L., Townsend J.P..  2018.  Neutral theory and the somatic evolution of cancer. Molecular Biology and Evolution.
Cannataro V.L, Gaffney S.G., Townsend J.P..  2018.  Effect sizes of somatic mutations in cancer. Journal of the National Cancer Institute.
Chan BK, Turner PE, Kim S, Mojibian HR, Elefteriades JA, Narayan D.  2018.  Phage treatment of an aortic graft infected with Pseudomonas aeruginosa.
Chan BK, Brown K, Kortright KE, Mao. S, Turner. PE.  2016.  Extending the lifetime of antibiotics: how can phage therapy help?
Chan BK, Sistrom M, Wertz JE, Kortright KE, Narayan D, Turner. PE.  2016.  Phage selection restores antibiotic sensitivity in MDR Pseudomonas aeruginosa Scientific Reports. volume 6
Chavan A., Griffith O., Wagner G.P.  2017.  The inflammation paradox in the evolution of mammalian pregnancy: turning a foe into a friend. Curr. Opinions in Genetics and Development.
Corbett S., Courtiol A., Lummaaa V, Moorad J., Stearns S.C..  2018.  Chronic disease and the Transition to Modernity: Mismatch and natural selection. Nature Reviews Genetics 19:419-430.
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Dornburg A., , , , , Townsend J.P..  2020.  Comparative genomics within and across Bilaterians illuminates the evolutionary history of ALK and LTK proto-oncogene origination and diversification. Genome Biology and Evolution..
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Erkenbrack E.M, Maziarz J.D, Griffith O.W, Liang C., Chavan A.R, Nnamani M.C, Wagner G.P.  2018.  "The mammalian decidual cell evolved from a cellular stress response.".
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Goldhill DH, Turner PE.  2014.  The evolution of life history trade-offs in viruses .
Gomez K., Miura S., Hulki L.A., Spell B.S., Townsend J.P., Kumar S..  2018.  Somatic evolutionary timings of driver mutations. BMC Cancer.
Griffith O.W, Arun C.R, Protopapas S., Maziarz J., Romero R., Wagner G.P.  2017.  The evolutionary origin of eutherian embryo implantation..
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Hong W.S, Shpak M., Townsend J.P..  2015.   Inferring the origin of metastases from cancer phylogenies. Cancer Research 75(19).
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Johannesson H., Townsend J.P., Hung C.-Y., Cole G.T., Taylor J.W..  2005.  Concerted evolution of the repeats of an immunomodulating cell surface protein, SOWgp, of the human pathogenic fungi Coccidioides immitis and C. posadasii. Genetics 171.
Johannesson H., Kasuga T., Schaller R.A., Good B., Gardner M.J., Townsend J.P., Cole G.T., Taylor J.W..  2006.  Phase-specific gene expression underlying morphological adaptations of the dimorphic human pathogenic fungus, Coccidioides posadasii. Fungal Genetics and Biology 43(8).
Johnsen P.J, Townsend J.P., Bohn T., Simonsen G.S., Sundsfjord A., Nielsen K.M..  2009.  Factors affecting the reversal of antimicrobial resistance. The Lancet Infectious Diseases 9(6).
Johnsen P.J, Townsend J.P, Bohn T., Simonsen G.S., Sundsfjord A., Nielsen K.M..  2011.  Retrospective evidence for a biological cost of vancomycin resistance in the absence of glycopeptide selective pressures. Journal of Antimicrobial Chemotherapy 66.
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Kortright KE, Chan BK, Koff JL, Turner PE.  2019.   Phage therapy: a renewed approach to combat antibiotic-resistant bacteria .
Kshitiz K, Afzal J, Maziarz JD, Hamidzadeh A, Liang C, Erkenbrack EM, Nam H, Haeger J-D, Pfarrer C, Hoang T et al..  2019.  Evolution or placental invasion and cancer metastasis are causally linked. Nature Ecology & Evolution.

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